Fix some pin inits

Marlin/src/lcd/extui/lib/anycubic_i3mega/anycubic_i3mega_lcd.cpp

 
   // initialise the state of the key pins running on the tft
   #if ENABLED(SDSUPPORT) && PIN_EXISTS(SD_DETECT)
-    pinMode(SD_DETECT_PIN, INPUT);
-    WRITE(SD_DETECT_PIN, HIGH);
+    SET_INPUT_PULLUP(SD_DETECT_PIN);
   #endif
   #if ENABLED(FILAMENT_RUNOUT_SENSOR)
-    pinMode(FIL_RUNOUT_PIN, INPUT);
-    WRITE(FIL_RUNOUT_PIN, HIGH);
+    SET_INPUT_PULLUP(FIL_RUNOUT_PIN);
   #endif
 
   mediaPrintingState = AMPRINTSTATE_NOT_PRINTING;

Marlin/src/lcd/extui/lib/mks_ui/printer_operation.cpp

 
 void filament_pin_setup() {
   #if PIN_EXISTS(MT_DET_1)
-    pinMode(MT_DET_1_PIN, INPUT_PULLUP);
+    SET_INPUT_PULLUP(MT_DET_1_PIN);
   #endif
   #if PIN_EXISTS(MT_DET_2)
-    pinMode(MT_DET_2_PIN, INPUT_PULLUP);
+    SET_INPUT_PULLUP(MT_DET_2_PIN);
   #endif
   #if PIN_EXISTS(MT_DET_3)
-    pinMode(MT_DET_3_PIN, INPUT_PULLUP);
+    SET_INPUT_PULLUP(MT_DET_3_PIN);
   #endif
 }