Fix some include paths

Marlin/src/feature/fwretract.cpp

 #include "../module/stepper.h"
 
 #if ENABLED(RETRACT_SYNC_MIXING)
-  #include "../feature/mixing.h"
+  #include "mixing.h"
 #endif
 
 // private:

Marlin/src/feature/pause.cpp

 #include "../module/temperature.h"
 
 #if ENABLED(FWRETRACT)
-  #include "../feature/fwretract.h"
+  #include "fwretract.h"
 #endif
 
 #if ENABLED(FILAMENT_RUNOUT_SENSOR)
-  #include "../feature/runout.h"
+  #include "runout.h"
 #endif
 
 #include "../lcd/ultralcd.h"

Marlin/src/module/configuration_store.cpp

 #endif
 
 #if HAS_BED_PROBE
-  #include "../module/probe.h"
+  #include "probe.h"
 #endif
 
 #include "../feature/fwretract.h"

Marlin/src/module/delta.cpp

 
 #if ENABLED(SENSORLESS_HOMING)
   #include "../feature/tmc_util.h"
-  #include "../module/stepper_indirection.h"
+  #include "stepper_indirection.h"
 #endif
 
 // Initialized by settings.load()

Marlin/src/module/endstops.cpp

 
 #include "../Marlin.h"
 #include "../sd/cardreader.h"
-#include "../module/temperature.h"
+#include "temperature.h"
 #include "../lcd/ultralcd.h"
 
 #if ENABLED(ENDSTOP_INTERRUPTS_FEATURE)
 #endif
 
 #if ENABLED(ABORT_ON_ENDSTOP_HIT_FEATURE_ENABLED) && ENABLED(SDSUPPORT)
-  #include "../module/printcounter.h" // for print_job_timer
+  #include "printcounter.h" // for print_job_timer
 #endif
 
 Endstops endstops;

Marlin/src/module/motion.h

 #include "../inc/MarlinConfig.h"
 
 #if IS_SCARA
-  #include "../module/scara.h"
+  #include "scara.h"
 #endif
 
 // Axis homed and known-position states

Marlin/src/module/planner.cpp

 #include "planner.h"
 #include "stepper.h"
 #include "motion.h"
-#include "../module/temperature.h"
+#include "temperature.h"
 #include "../lcd/ultralcd.h"
 #include "../core/language.h"
 #include "../gcode/parser.h"

Marlin/src/module/probe.cpp

 #endif
 
 #if ENABLED(DELTA)
-  #include "../module/delta.h"
+  #include "delta.h"
 #endif
 
 #if ENABLED(BABYSTEP_ZPROBE_OFFSET)
 float zprobe_zoffset; // Initialized by settings.load()
 
 #if HAS_Z_SERVO_PROBE
-  #include "../module/servo.h"
+  #include "servo.h"
 #endif
 
 #if ENABLED(SENSORLESS_PROBING)

Marlin/src/module/stepper.cpp

 #include "planner.h"
 #include "motion.h"
 
-#include "../module/temperature.h"
+#include "temperature.h"
 #include "../lcd/ultralcd.h"
 #include "../core/language.h"
 #include "../gcode/queue.h"

Marlin/src/module/stepper.h

   #include "speed_lookuptable.h"
 #endif
 
-#include "../module/planner.h"
+#include "planner.h"
 #include "../core/language.h"
 
 class Stepper {

Marlin/src/module/stepper_indirection.cpp

 
 #include "../inc/MarlinConfig.h"
 
-#include "../module/stepper.h"
+#include "stepper.h"
 
 #if HAS_DRIVER(L6470)
   #include "L6470/L6470_Marlin.h"

Marlin/src/module/tool_change.cpp

 #endif
 
 #if ENABLED(SWITCHING_EXTRUDER) || ENABLED(SWITCHING_NOZZLE) || ENABLED(SWITCHING_TOOLHEAD)
-  #include "../module/servo.h"
+  #include "servo.h"
 #endif
 
 #if ENABLED(EXT_SOLENOID) && DISABLED(PARKING_EXTRUDER)