Co-Authored-By: akunt

Better encapsulation and considerably reduce stepper jitter

Co-Authored-By: ejtagle <ejtagle@hotmail.com>

Fix #10330

- Watchdog reset during SD Card initialization.
- Move `DebugMonitor` to `DebugMonitor_Due.cpp`.
- Since the watchdog is enabled on boot do extra resets during init.
- Have `thermalManager` do watchdog reset before its ISR starts to prevent reset.
- Ensure that timers are stopped before reprogramming them to address tone issues.
- Improve SAM3XE reset when reflashed through the native port.

In answer to #10001

Add an option to retrieve the currently open file name (long filename if possible).

Thanks Chuck Hellebuyck.

* SD Status auto-report feature
Feature Request #9751

Based on https://github.com/MarlinFirmware/Marlin/issues/8746#issuecomment-368471901 by @benlye

If last file in directory has short filename and is preceded by a deleted long file name. SD menu will wrongly report long deleted file name as last entry

This will save some program memory with no speed lose

It seems that some SD cards don't support CRC_ON_OFF command. This fix will permit to use also these cards but leaving CRC check active on the system

Followup to #8122

add sort alpha section to other LPC1768 boards

* Re-Print of same SD Memory Card file with single click

* Re-Print of same SD Memory Card file with single click
* This is the bugfix-v2.0.0 version of  https://github.com/MarlinFirmware/Marlin/pull/8104

* Merging early because of build failures.  See #8105

* Make LPC1768 pinmapping not specific to Re-ARM

* Add HAL_PIN_TYPE and LPC1768 pin features

* M43 Updates

* Move pin map into pinsDebug_LPC1768.h

* Incorporate comments and M226

* Fix persistent store compilation issues

* Update pin features

* Update MKS SBASE pins

* Use native LPC1768 pin numbers in M42, M43, and M226

As pointed out by @marcio-ao in #7638